PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61800.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 64aa    MW: 7469.97 Da    PI: 9.31
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61800.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.26.1e-085461055
                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                + RR +i +++ +L+ ++P +    s+K+  + +Le++++Y++sLq
  EPS61800.1  5 QMRRGKIIEKIKRLQHIVPAC----SEKMGMVVMLEEVINYVRSLQ 46
                68*******************....9*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003530.0023151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.28145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-12560IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-5546IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-13555IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.88E-5750No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    Send to blast
SIVFQMRRGK IIEKIKRLQH IVPACSEKMG MVVMLEEVIN YVRSLQNQVE FLSIKLTETG  60
MFLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006374179.13e-21hypothetical protein POPTR_0015s03760g, partial
RefseqXP_008240256.14e-21PREDICTED: transcription factor BEE 1
RefseqXP_007210857.14e-21hypothetical protein PRUPE_ppa015301mg
SwissprotQ8GWK73e-21BEE3_ARATH; Transcription factor BEE 3
TrEMBLS8C4I85e-40S8C4I8_9LAMI; Uncharacterized protein (Fragment)
STRINGPOPTR_0015s03760.11e-20(Populus trichocarpa)
STRINGPOPTR_0012s05210.13e-19(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.21e-22BR enhanced expression 3
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]